Colon to semicolon bug fixed

.gitignore

@@ -0,0 +1,2 @@
+testfolder/*
+test*.txt

install.sh

@@ -24,9 +24,16 @@ if [ "$EUID" -ne 0 ]; then
 	echo "This script must be run as root to install system-wide"
 	exit 1
 fi
-cp ./transfer.pl /usr/local/bin/transfer.pl
-cp ./estimate.pl /usr/local/bin/estimate.pl
-cp ./fixlist.sh /usr/local/bin/fixlist.sh
+cp ./src/transfer.pl /usr/local/bin/transfer
+cp ./src/estimate.pl /usr/local/bin/estimate
+cp ./src/fixlist.sh /usr/local/bin/fixlist
 chmod 755 /usr/local/bin/transfer.pl
 chmod 755 /usr/local/bin/estimate.pl
 chmod 755 /usr/local/bin/fixlist.sh
+
+cpan install Getopt::Long
+
+if [ -z "$(echo $PATH | grep '.usr.local.bin')" ]; then
+	echo "/usr/local/bin not found in your PATH."
+	echo "Please add /usr/local/bin to your PATH export"
+fi

man/transfer.1

@@ -0,0 +1,33 @@
+.Dd August 09, 2024
+.Os FreeBSD 14.1
+.Dt TRANSFER [1]
+.Sh NAME
+.Nm transfer 
+.Nd transfer files using rsync
+.Sh SYNOPSIS
+
+.Nm transfer 
+.Op Fl path Ar inpath
+.Op Fl host Ar host
+.Op Fl user Ar username
+.Op Fl dest Ar outpath
+.Op Fl flags Ar rsyncflags
+.Op Fl verbose
+.Op Fl help
+.Op Fl dir
+
+.Sh DESCRIPTION
+
+The .Nm transfer utility takes as input a list of absolute file or directory
+paths, and transfers those files or directories and their contents to a remote
+system.
+
+The following options are available:
+
+.Op path 
+.Bd -offset indent 
+
+.Sh ENVIRONMENT
+.Sh FILES 
+.Sh EXAMPLES
+

src/transfer.pl

@@ -0,0 +1,150 @@
+#!/usr/bin/env perl
+# Transfer script transfer.pl
+# Author: Elia Farin 
+# Written: 8/9/24
+# Modified: 8/9/24
+# License: AGPL-3.0-or-later
+#
+#   Copyright (C) 2024 Elia Farin
+#
+#   This program is free software: you can redistribute it and/or modify
+#   it under the terms of the GNU Affero General Public License as
+#   published by the Free Software Foundation, either version 3 of the
+#   License, or (at your option) any later version.
+#
+#   This program is distributed in the hope that it will be useful,
+#   but WITHOUT ANY WARRANTY; without even the implied warranty of
+#   MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+#   GNU Affero General Public License for more details.
+#
+#   You should have received a copy of the GNU Affero General Public License
+#   along with this program.  If not, see <https://www.gnu.org/licenses/>.
+#
+use strict;
+use Getopt::Long;
+
+
+# sane defaults
+my $path= "";
+my $host = "";
+# get running user's name
+my $user = getlogin() || (getpwuid($<))[0] || $ENV{LOGNAME} || $ENV{USER};
+my $dest= "/home/$user/Downloads/";
+my $flags = "rvz";
+my $verbose;
+my $help;
+my $dir;
+my $retries = 2;
+my $tries = 0;
+my $returncode;
+# options
+my $result = GetOptions ( "path=s" => \$path,
+	"host=s" => \$host,
+	"dir" => \$dir,
+	"user=s" => \$user,
+	"dest=s" => \$dest,
+	"flags=s" => \$flags,
+	"verbose" => \$verbose,
+	"retries" => \$retries,
+	"help" => \$help);
+
+
+sub transfer {
+	#print "file: $file, host: $host, srcdir: $dir, user: $user, dest: $dest flags: $flags verbose: $verbose help: $help\n";
+	### Begin main logic
+	# help catch
+	if ($help) {
+		help();
+
+	} 
+	# if we're passed the directory flag and we have the required options set
+	elsif ($dir && length $host && length $dest && length $user) {
+
+		print "Transferring object 1 of 1 \n\n";
+		$tries = 0;
+		# transfer our directory
+		while ($tries <= $retries) {
+
+			$returncode = system("rsync", "-$flags", "$dir", "$user\@$host:$dest");
+			if ($returncode == 0) {
+				last;
+			} else {
+				$tries++;
+			}
+		}
+	}
+	# If we have all the right options set for an infile, begin the copy
+	elsif (length $path && length $host && length $user && length $dest) {
+		#print "in elsif block\n";
+		# Open our filehandle
+		open my $info, $path or die "Could not open $path: $!";
+		
+		my $linesnum = 0;
+		while( my $iterline = <$info>) {
+			#print "in first while loop\n";
+			$linesnum++;
+		}
+
+		# wqe need to close the filehandle or we won't be able to read the file again
+		close $path;
+
+		# open our filehandle, this time for taking action
+		open $info, $path or die "Could not open $path: $!";
+		my $xfernum = 0;
+		# read line by line
+		while( my $line = <$info> ) {
+			#print "in second while loop\n";
+			$xfernum++;
+			chomp $line;
+			$tries = 0;
+			# actual copy logic
+			if (length $verbose) {
+				while ($tries <= $retries) {
+					#print "in verbose section";
+					print "\n\nTransferring object $xfernum of $linesnum\n\n";
+					$returncode = system("rsync", "-vvv", "-$flags", "$line", "$user\@$host:$dest");
+					if ($returncode == 0) {
+						last;
+					} else {
+						$tries++;
+					}
+			}
+			} else {
+				while ($tries <= $retries) {
+					#print "in non-verbose section";
+					print "\n\nTransferring object $xfernum of $linesnum\n\n";
+					$returncode = system("rsync", "-$flags", "$line", "$user\@$host:$dest");
+
+					if ($returncode == 0) {
+						last;
+					} else {
+						$tries++;
+					}
+				}
+			}
+		}
+		close $path;
+
+	} 
+	# if we fail the variables check, print usage help
+	else {
+		#print "In help else\n";
+		help();
+	}
+
+	# help subroutine
+	sub help {
+		print "Usage: $ARGV[0] --path <infile or directory> [--dir] --host <IP or DNS name> --user <username> --dest <destination path> [--flags <rsync flags>] [--verbose] [--help]\n
+		--path 		- Input file to read or directory to copy
+		--host 		- IP address or hostname of the remote system
+		--dir 		- enable directory copy mode
+		--user 		- User account on the remote system to use
+		--dest 		- Destination on the remote system to copy files to
+		--flags 	- rsync flags to use when copying the files over. Defaults to rvz
+		--retries 	- number of retries on failed rsync (default 2)
+		--verbose	- run rsync with -vvv
+		--help 		- show this help\n";
+	}
+}
+
+transfer();

transfer.pl

@@ -1,90 +0,0 @@
-#!/usr/local/bin/perl
-# Transfer script transfer.pl
-# Author: Elia Farin 
-# Written: 8/9/24
-# Modified: 8/9/24
-# License: AGPL-3.0-or-later
-#
-#   Copyright (C) 2024 Elia Farin
-#
-#   This program is free software: you can redistribute it and/or modify
-#   it under the terms of the GNU Affero General Public License as
-#   published by the Free Software Foundation, either version 3 of the
-#   License, or (at your option) any later version.
-#
-#   This program is distributed in the hope that it will be useful,
-#   but WITHOUT ANY WARRANTY; without even the implied warranty of
-#   MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-#   GNU Affero General Public License for more details.
-#
-#   You should have received a copy of the GNU Affero General Public License
-#   along with this program.  If not, see <https://www.gnu.org/licenses/>.
-#
-use strict;
-use Getopt::Long;
-use re;
-my $username = getlogin() || (getpwuid($<))[0] || $ENV{LOGNAME} || $ENV{USER};
-
-# sane defaults
-my $file = "";
-my $host = "";
-my $directory = ".";
-my $user = $username;
-my $dest= "/home/$username/Downloads/";
-my $flags = "rvz";
-my $verbose;
-my $help;
-
-# options
-my $result = GetOptions ( "file=s" => \$file,
-	"host=s" => \$host,
-	"directory=s" => \$directory,
-	"user=s" => \$user,
-	"dest=s" => \$dest,
-	"flags=s" => \$flags,
-	"verbose" => \$verbose,
-	"help" => \$help);
-
-### Begin main logic
-# help catch
-if ($help) {
-	help();
-
-}
-# If we have all the right arguments, begin the copy
-elsif (length $file && length $host && length $user && length $dest && length $directory) {
-
-	# Open our filehandle
-	open my $info, $file or die "Could not open $file: $!";
-
-	# read line by line
-	while( my $line = <$info> ) {
-		chomp $line;
-		# actual copy logic
-		if (length $verbose) {
-			system("rsync", "-vvv", "-$flags", "$directory/$line", "$user\@$host:$dest");
-		} else {
-		system("rsync", "-$flags", "$directory/$line", "$user\@$host:$dest");
-		}
-	}
-
-} 
-# if we fail the variables check, print usage help
-else {
-	help();
-}
-
-# help subroutine
-sub help {
-	print "Usage: $ARGV[0] --file= --host= --directory= --user= --dest= --flags= [--verbose] [--help]\n
-	--file - Input file to read with list of files/folders to transfer \n
-	--host - IP address or hostname of the remote system\n
-	--directory - Relative or absolute path to the folder containing the files/folders to transfer, \n
-		      with no trailing slash\n
-	--user - User account on the remote system to use\n
-	--dest - Destination on the remote system to copy files to\n
-	--flags - rsync flags to use when copying the files over\n
-	--verbose - run rsync with -vvv\n
-	--help - show this help\n";
-}
-